configure: netCDF 4.7.4 checking build system type... aarch64-unknown-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking target system type... aarch64-unknown-linux-gnu checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no configure: checking user options checking whether a NCIO_MINBLOCKSIZE was specified... 256 checking for valgrind... no checking if fsync support is enabled... no checking if jna bug workaround is enabled... no checking whether we should build netCDF-4... yes checking whether we should build with HDF5... yes checking do we require hdf5 dynamic-loading support... yes checking whether reading of HDF4 SD files is to be enabled... no checking whether to fetch some sample HDF4 files from Unidata ftp site to test HDF4 reading (requires wget)... no checking whether we should attempt to install netcdf-fortran (EXPERIMENTAL)... no checking whether parallel IO tests should be run... no checking whether a user specified program to run mpi programs... mpiexec checking whether a default chunk size in bytes was specified... 4194304 checking whether a maximum per-variable cache size for HDF5 was specified... 67108864 checking whether a number of chunks for the default per-variable cache was specified... 10 checking whether a default file cache size for HDF5 was specified... 16777216 checking whether a default file cache maximum number of elements for HDF5 was specified... 4133 checking whether a default cache preemption for HDF5 was specified... 0.75 checking whether netCDF-4 logging is enabled... no checking whether nc_set_log_level() function is included (will do nothing unless enable-logging is also used)... yes checking whether DAP client(s) are to be built... yes checking whether make supports the include directive... yes (GNU style) checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... gcc3 checking for curl_easy_setopt in -lcurl... yes checking for library containing curl_easy_setopt... -lcurl checking whether dap remote testing should be enabled (default on)... no checking whether dap remote authorization testing should be enabled (default off)... no checking which remote test server(s) to use... remotetest.unidata.ucar.edu checking whether the time-consuming dap tests should be enabled (default off)... no checking whether to enable strict null-byte header padding when reading (default off)... no checking whether FFIO will be used... no checking whether STDIO will be used... no checking whether examples should be built... yes checking whether v2 netCDF API should be built... yes checking whether the ncgen/ncdump/nccopy should be built... yes checking whether test should be built and run... yes checking whether large file (> 2GB) tests should be run... no checking whether benchmarks should be run... no checking whether extreme numbers should be used in tests... yes checking where to put large temp files if large file tests are run... . checking Extra values for _NCProperties... checking whether user-defined format 0 was specified... checking whether a magic number for user-defined format 0 was specified... checking whether user-defined format 1 was specified... checking whether a magic number for user-defined format 1 was specified... configure: finding C compiler checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) gcc3 checking for an ANSI C-conforming const... yes checking whether CURLOPT_USERNAME is defined... yes checking whether CURLOPT_PASSWORD is defined... yes checking whether CURLOPT_KEYPASSWD is defined... yes checking whether CURLINFO_RESPONSE_CODE is defined... yes checking whether CURLOPT_BUFFERSIZE is defined... yes checking whether CURLOPT_TCP_KEEPALIVE is defined... yes configure: setting up libtool checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert aarch64-unknown-linux-gnu file names to aarch64-unknown-linux-gnu format... func_convert_file_noop checking how to convert aarch64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes configure: finding other utilities checking for m4... m4 checking for doxygen... no configure: WARNING: Doxygen not found - documentation will not be built checking for dot... dot checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no configure: displaying some results checking CPPFLAGS... checking CC CFLAGS... gcc checking type gcc... gcc is /usr/bin/gcc checking CXX... unset checking FC... unset checking F90... unset checking AR... ar checking AR_FLAGS... cru checking type ar... ar is /usr/bin/ar checking NM... /usr/bin/nm -B checking NMFLAGS... configure: checking types, headers, and functions checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking libgen.h usability... yes checking libgen.h presence... yes checking for libgen.h... yes checking for ANSI C header files... (cached) yes checking locale.h usability... yes checking locale.h presence... yes checking for locale.h... yes checking stdio.h usability... yes checking stdio.h presence... yes checking for stdio.h... yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/stat.h... (cached) yes checking getopt.h usability... yes checking getopt.h presence... yes checking for getopt.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for sys/types.h... (cached) yes checking sys/resource.h usability... yes checking sys/resource.h presence... yes checking for sys/resource.h... yes checking ftw.h usability... yes checking ftw.h presence... yes checking for ftw.h... yes checking for strlcat... no checking for snprintf... yes checking for strcasecmp... yes checking for fileno... yes checking for strdup... yes checking for strtoll... yes checking for strtoull... yes checking for mkstemp... yes checking for mktemp... yes checking for random... yes checking for getrlimit... yes checking for gettimeofday... yes checking for fsync... yes checking for MPI_Comm_f2c... no checking for MPI_Info_f2c... no checking for memmove... yes checking for getpagesize... yes checking for sysconf... yes checking whether mmap is enabled for in-memory files... yes checking for mmap... yes checking for mremap... yes checking whether MAP_ANONYMOUS is defined... yes checking whether byte range support is enabled... yes checking for size_t... yes checking for working alloca.h... yes checking for alloca... yes checking whether isnan is declared... yes checking whether isinf is declared... yes checking whether isfinite is declared... yes checking for struct stat.st_blksize... yes checking for IEEE floating point format... yes checking for size_t... (cached) yes checking for ssize_t... yes checking for schar... no checking for uchar... no checking for longlong... no checking for ushort... yes checking for uint... yes checking for int64... no checking for uint64... no checking for off_t... yes checking for uintptr_t... yes checking whether char is unsigned... yes checking whether byte ordering is bigendian... no checking size of short... 2 checking size of int... 4 checking size of long... 8 checking size of long long... 8 checking size of float... 4 checking size of double... 8 checking size of off_t... 8 checking size of size_t... 8 checking size of unsigned long long... 8 checking whether CDF5 support should be disabled... yes checking size of unsigned char... 1 checking size of ushort... 2 checking size of uint... 4 checking size of ushort... (cached) 2 checking size of uint... (cached) 4 checking size of ssize_t... 8 checking size of void*... 8 checking for library containing deflate... -lz checking for library containing dlopen... -ldl checking for floor in -lm... yes checking for library containing H5Fflush... -lhdf5 checking for library containing H5DSis_scale... -lhdf5_hl checking hdf5.h usability... yes checking hdf5.h presence... yes checking for hdf5.h... yes checking for H5Pget_fapl_mpio... yes checking for H5Pset_deflate... yes checking for H5Z_SZIP... yes checking for H5free_memory... yes checking for H5resize_memory... yes checking for H5allocate_memory... yes checking for H5Pset_libver_bounds... yes checking for H5Pset_all_coll_metadata_ops... yes checking for H5Dread_chunk... yes checking whether parallel io is enabled in hdf5... yes checking whether HDF5 allows parallel filters... yes checking whether szlib was used when building HDF5... yes checking whether parallel I/O is enabled for netcdf-4... yes checking whether parallel I/O for classic files is to be enabled... yes checking for ncmpi_create in -lpnetcdf... yes checking Is libpnetcdf version 1.6.0 or later?... yes checking for full path of header file pnetcdf.h... /usr/local/include/pnetcdf.h checking if erange-fill is enabled in PnetCDF... yes checking if relax-coord-bound is enabled in PnetCDF... yes checking for unsigned long long int... yes checking for long long int... yes checking for unsigned long long int... (cached) yes checking what to call the output of the ftpbin target... binary-netcdf-4.7.4.tar checking if libtool needs -no-undefined flag to build shared libraries... no checking value of LIBS... -lpnetcdf -lhdf5_hl -lhdf5 -lm -ldl -lz -lcurl checking If compilation is for use with JNA... no checking whether filter testing should be run... yes