.. role:: raw-html-m2r(raw)
   :format: html


Custom-built Software
---------------------

All R packages and most of the Python packages are custom-built automatically.

The libraries, packages, and applications listed below have dedicated build sections in the Dockerfile of the platform:


* NVIDIA NCCL (2.9.8-1) (\ :raw-html-m2r:`<del>2.8.3-1</del>`\ )
* NVIDIA Thrust (1.11.0)
* hwloc (2.5.0) (\ :raw-html-m2r:`<del>2.4.1</del>`\ )
* POCL (1.7) (1.6)
* oneTBB (2021.1.1)
* UCX (1.11.0) :raw-html-m2r:`<del>(1.9.0)</del>`
* OpenMPI (4.1.1) :raw-html-m2r:`<del>(4.1.0)</del>`
* FFTW (3.3.8) :raw-html-m2r:`<del>(3.3.9)</del>`
* R (4.1.0) (\ :raw-html-m2r:`<del>4.0.5</del>`\ )
* HDF5 (1.10.7)

  * SZIP (2.1.1)

* :raw-html-m2r:`<del>SuiteSparse (5.8.1)</del>` (DISABLED: Installed as apt package)
* Sundials (5.7.0) (\ :raw-html-m2r:`<del>5.6.1</del>`\ )
* xgBoost (1.4.2) (\ :raw-html-m2r:`<del>1.3.3</del>`\ )
* iGraph (0.9.4) (\ :raw-html-m2r:`<del>0.9.1</del>`\ )
* ImageMagick (7.1.0-4) :raw-html-m2r:`<del>(7.0.11-13)</del>`

  * FlashPIX (1.3.1-10)
  * liblqr (1-0.4.2)
  * FLIF (master)
  * autotrace (master)

* GDAL (3.2.3) (\ :raw-html-m2r:`<del>3.2.2</del>`\ )

  * ARMADILLO (10.6.1) :raw-html-m2r:`<del>(10.1.2)</del>`
  * PNETCDF (1.12.2) :raw-html-m2r:`<del>(1.12.1)</del>`
  * NETCDF (4.8.0) :raw-html-m2r:`<del>(4.7.4)</del>`
  * PDWT (2.7.2)
  * GTA (1.2.1)
  * KEA (1.4.14)
  * JASPER (2.0.14)
  * TILEDB (2.2.9) :raw-html-m2r:`<del>(2.1.3)</del>`

* GMT (6.2.0) :raw-html-m2r:`<del>(6.1.1)</del>`

  * DCW (2.0.0) :raw-html-m2r:`<del>(1.1.4)</del>`
  * GSHHG (2.3.7)

* PDAL (2.3.0) :raw-html-m2r:`<del>(2.2.0)</del>`

  * cpd (master)
  * fgt (master)
  * LASZIP (3.4.3)
  * LIBLAS (1.7.0)
  * libexecinfo (master)
  * NITRO (2.10.2)
  * MBSYSTEM (5.7.8)

* PostGIS (3.1.3) :raw-html-m2r:`<del>(3.1.1)</del>`
* OpenCV (4.5.3) :raw-html-m2r:`<del>(4.5.2)</del>`
* Octave (6.3.0) :raw-html-m2r:`<del>(6.2.0)</del>`
* COLMAP (master)
* GMTSAR (6.1) :raw-html-m2r:`<del>(6.0)</del>`
* ecCodes (2.22.1)
* PyTorch (1.9.0) :raw-html-m2r:`<del>(1.8.1)</del>`
* Torchvision (0.10.0) :raw-html-m2r:`<del>(0.9.1)</del>`
* JAXlib (0.1.69) :raw-html-m2r:`<del>(0.1.60)</del>`
* JAX (0.2.18) :raw-html-m2r:`<del>(0.2.13)</del>`
* TensorFlow (2.4.1)
* ONNXRuntime (1.8.1) :raw-html-m2r:`<del>(1.7.0)</del>`
* ONNX (1.10.0) :raw-html-m2r:`<del>(1.8.0)</del>`
* MXNet (1.8.0) (\ :raw-html-m2r:`<del>1.7.0</del>`\ )
* :raw-html-m2r:`<del>QEMU (5.2.0)</del>` (DISABLED: x86-64 units are available)
* PYQT (5.15.2)
* QScintilla (2.11.6)
* RStudio (1.3.1093)
* GRASS (7.8.5)
* SAGA GIS (7.9.1) :raw-html-m2r:`<del>(7.9.0)</del>`

  * Lemon (1.3.1)
  * Vigra (master)
  * libHaru (master)

* QGIS (3.20.1) :raw-html-m2r:`<del>(3.18.3)</del>`
* :raw-html-m2r:`<del>Apache Arrow (1.0.1)</del>`
* :raw-html-m2r:`<del>DLPack (0.3)</del>`
* :raw-html-m2r:`<del>RMM (0.19.0a)</del>`
* :raw-html-m2r:`<del>cuDF (0.19.0a)</del>`
* :raw-html-m2r:`<del>cuSpatial (0.19.0a)</del>`

Last updated: 01/06/2021